Sequence Heatmap Dashboard

1 Upload Data Files

Instructions: Upload a merged data file from the Data Transformation module (must contain Protein, start, end, and Avg_* columns). Optionally upload a FASTA file for protein sequences.

Merged Data File *

Click or drag CSV / XLSX

Download example CSV · Load example

FASTA File (optional)

Click or drag .fasta / .fa

Download example FASTA · Load example

2 Select Proteins & Variables

Proteins Hold Ctrl/Cmd to select multiple

Sample Variables Hold Ctrl/Cmd to select multiple

Visualization Settings:

Data Source & Overlay

Select Items Select Peptide Intervals or Bioactive Functions above to enable

Display Lines

Individual Only Individual + Averaged Averaged Only

Plot Orientation

Landscape Portrait Interactive Landscape BETA Compact BETA

Log₁₀ Transform Manual Y-Axis

Appearance Settings:

Heatmap Color

Line Plot Color

Avg Line Color

X-Axis Label

Y-Axis Label

Legend Title (Sample Type)

Legend Title (Peptide Counts)

Legend Title (Average Abundance)

3 Heatmap Output

Upload a data file and select proteins & variables to generate a heatmap.

Sequence Heatmap Dashboard

Portrait Layout

Portrait — Interactive (hover for details)

Landscape Layout

Landscape — Interactive (hover for details)

Compact Layout (Interactive)